If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ), 'gf_id' => 'ORTHO05D000366', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ), 'data_identifier' => 'ORTHO05D000366', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'ORTHO05D000366', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1052', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33150' => 'bna', 'A02p02930' => 'bna', 'A03p21830' => 'bna', 'A05p26950' => 'bna', 'A05p44770' => 'bna', 'A08p36490' => 'bna', 'A08p36500' => 'bna', 'A09p27850' => 'bna', 'A09p67520' => 'bna', 'A09p67530' => 'bna', 'A09p67540' => 'bna', 'A09p67550' => 'bna', 'A10p03770' => 'bna', 'A10p03790' => 'bna', 'A10p23670' => 'bna', 'Aa31LG11G14380' => 'aar', 'Aa31LG1G19440' => 'aar', 'Aa31LG1G19450' => 'aar', 'Aa31LG1G19460' => 'aar', 'Aa31LG1G19470' => 'aar', 'Aa31LG1G19490' => 'aar', 'Aa31LG1G19500' => 'aar', 'Aa31LG5G12430' => 'aar', 'Aa31LG5G20590' => 'aar', 'Aa31LG8G8390' => 'aar', 'Aa31LG9G15620' => 'aar', 'Aa31sc34G30' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3755' => 'aag', 'Actinidia14235' => 'ach', 'Actinidia23441' => 'ach', 'Actinidia30512' => 'ach', 'Actinidia30513' => 'ach', 'Ah.01g002810' => 'amhyb', 'Ah.09g235990' => 'amhyb', 'Ah.11g041360' => 'amhyb', 'Ah.11g041430' => 'amhyb', 'Ah.11g041460' => 'amhyb', 'Ah.11g041470' => 'amhyb', 'Ah.11g041480' => 'amhyb', 'Ah.11g041490' => 'amhyb', 'Ah.11g041510' => 'amhyb', 'Ah.11g041520' => 'amhyb', 'Ah.11g041550' => 'amhyb', 'Ah.11g041560' => 'amhyb', 'AL1G15010' => 'aly', 'AL1G15020' => 'aly', 'AL1G15030' => 'aly', 'AL1G15040' => 'aly', 'AL3G11050' => 'aly', 'AL3G35910' => 'aly', 'AL4G36350' => 'aly', 'AL6G26010' => 'aly', 'AL6G26030' => 'aly', 'AL6G45670' => 'aly', 'Aqoxy1G02893' => 'aox', 'Aqoxy2G03149' => 'aox', 'Aqoxy2G03150' => 'aox', 'Aqoxy4G01998' => 'aox', 'Aqoxy4G01999' => 'aox', 'Aqoxy5G00602' => 'aox', 'arahy.Tifrunner.gnm1.ann1.5X6IC7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.79B2B8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9HGS1L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ID0B6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J7K1XS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JTR2TE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SI2KIW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y4D5W6' => 'arhy', 'AT1G05240' => 'ath', 'AT1G05250' => 'ath', 'AT1G05260' => 'ath', 'AT2G39040' => 'ath', 'AT3G01190' => 'ath', 'AT3G21770' => 'ath', 'AT4G11290' => 'ath', 'AT5G15180' => 'ath', 'ATR0706G157' => 'atr', 'ATR0706G167' => 'atr', 'ATR0794G064' => 'atr', 'ATR0794G124' => 'atr', 'Atru.chr10.2141' => 'acertr', 'Atru.chr10.551' => 'acertr', 'Atru.chr4.2732' => 'acertr', 'Atru.chr5.1293' => 'acertr', 'AUR62004071' => 'cqu', 'AUR62007584' => 'cqu', 'AUR62012604' => 'cqu', 'AUR62012641' => 'cqu', 'AUR62014733' => 'cqu', 'AUR62016915' => 'cqu', 'AUR62022018' => 'cqu', 'AUR62025003' => 'cqu', 'AUR62034603' => 'cqu', 'AUR62034604' => 'cqu', 'AUR62036667' => 'cqu', 'AUR62036668' => 'cqu', 'AUR62039610' => 'cqu', 'AUR62039611' => 'cqu', 'AUR62042396' => 'cqu', 'BcaB01g01627' => 'bca', 'BcaB01g03643' => 'bca', 'BcaB02g06878' => 'bca', 'BcaB02g06879' => 'bca', 'BcaB02g06880' => 'bca', 'BcaB04g20558' => 'bca', 'BcaB04g21425' => 'bca', 'BcaB06g26285' => 'bca', 'BcaB08g36919' => 'bca', 'BcaC01g03760' => 'bca', 'BcaC01g05492' => 'bca', 'BcaC03g13423' => 'bca', 'BcaC04g18977' => 'bca', 'BcaC04g21127' => 'bca', 'BcaC05g24394' => 'bca', 'BcaC05g24395' => 'bca', 'BcaC05g24397' => 'bca', 'BcaC05g24398' => 'bca', 'BcaC05g28125' => 'bca', 'BcaC05g30394' => 'bca', 'BcaC05g30486' => 'bca', 'BcaC07g36854' => 'bca', 'BcaC07g36855' => 'bca', 'BcaC07g36856' => 'bca', 'BcaC07g42140' => 'bca', 'BcaC07g42141' => 'bca', 'BcaC07g42142' => 'bca', 'BcaC09g49118' => 'bca', 'BcaNung03325' => 'bca', 'BNapus_Darmor_BZH_scaffold_113p00020' => 'bna', 'BNapus_Darmor_BZH_scaffold_97p00180' => 'bna', 'BolC1t04195H' => 'bol', 'BolC1t05938H' => 'bol', 'BolC2t06690H' => 'bol', 'BolC3t14972H' => 'bol', 'BolC3t17167H' => 'bol', 'BolC5t29126H' => 'bol', 'BolC5t29128H' => 'bol', 'BolC5t32897H' => 'bol', 'BolC5t35124H' => 'bol', 'BolC8t46982H' => 'bol', 'BolC8t52713H' => 'bol', 'BolC8t52714H' => 'bol', 'BolC8t52715H' => 'bol', 'BolC8t52718H' => 'bol', 'BolC8t52719H' => 'bol', 'BolC8t52721H' => 'bol', 'BolC9t56370H' => 'bol', 'BolC9t59035H' => 'bol', 'BraA01t03440Z' => 'bra', 'BraA01t04642Z' => 'bra', 'BraA02t05265Z' => 'bra', 'BraA03t11419Z' => 'bra', 'BraA05t21576Z' => 'bra', 'BraA05t23180Z' => 'bra', 'BraA08t35552Z' => 'bra', 'BraA08t35553Z' => 'bra', 'BraA09t38354Z' => 'bra', 'BraA09t42083Z' => 'bra', 'BraA09t42084Z' => 'bra', 'BraA09t42085Z' => 'bra', 'BraA09t42086Z' => 'bra', 'BraA10t42650Z' => 'bra', 'BraA10t42651Z' => 'bra', 'BraA10t42652Z' => 'bra', 'BraA10t44431Z' => 'bra', 'C01p42420' => 'bna', 'C02p07570' => 'bna', 'C03p25900' => 'bna', 'C03p48870' => 'bna', 'C05p03470' => 'bna', 'C05p03500' => 'bna', 'C05p41590' => 'bna', 'C08p01820' => 'bna', 'C08p01830' => 'bna', 'C08p51800' => 'bna', 'C08p51810' => 'bna', 'C08p51820' => 'bna', 'C08p51830' => 'bna', 'C08p51860' => 'bna', 'C08p51870' => 'bna', 'C08p51880' => 'bna', 'C08p51900' => 'bna', 'C09p35270' => 'bna', 'C09p61960' => 'bna', 'C09p75350' => 'bna', 'CAN.G664.7' => 'can', 'CAN.G80.24' => 'can', 'CAN.G80.31' => 'can', 'CAN.G80.33' => 'can', 'CAN.G921.10' => 'can', 'CAN.G921.11' => 'can', 'CANSAT56G1670' => 'cansat', 'CANSAT56G2072' => 'cansat', 'CANSAT56G2328' => 'cansat', 'CANSAT56G4348' => 'cansat', 'CANSAT56G4404' => 'cansat', 'CANSAT64G0005' => 'cansat', 'CANSAT64G1480' => 'cansat', 'CANSAT64G1804' => 'cansat', 'CANSAT78G0254' => 'cansat', 'CANSAT78G0270' => 'cansat', 'CANSAT78G0926' => 'cansat', 'CANSAT78G1137' => 'cansat', 'CANSAT78G1140' => 'cansat', 'CANSAT80G0681' => 'cansat', 'CANSAT80G1766' => 'cansat', 'CARHR004710' => 'chi', 'CARHR004720' => 'chi', 'CARHR004730' => 'chi', 'CARHR075850' => 'chi', 'CARHR097720' => 'chi', 'CARHR133800' => 'chi', 'CARHR198130' => 'chi', 'CARHR255290' => 'chi', 'Carub.0001s0451' => 'cru', 'Carub.0001s0452' => 'cru', 'Carub.0001s0455' => 'cru', 'Carub.0003s0095' => 'cru', 'Carub.0003s2183' => 'cru', 'Carub.0004s2110' => 'cru', 'Carub.0006s1335' => 'cru', 'Carub.0006s1336' => 'cru', 'Carub.0006s3017' => 'cru', 'Ca_01589_v3' => 'car', 'Ca_09105_v3' => 'car', 'Ca_27242_v3' => 'car', 'Ca_27750_v3' => 'car', 'Ca_29659_v3' => 'car', 'Cc00_g17540' => 'ccan', 'Cc00_g17550' => 'ccan', 'Cc00_g17940' => 'ccan', 'Cc00_g20330' => 'ccan', 'Cc01_g05130' => 'ccan', 'Cc03_g02450' => 'ccan', 'Cc03_g02520' => 'ccan', 'Cc03_g02530' => 'ccan', 'Cc03_g13410' => 'ccan', 'Cc05_g04970' => 'ccan', 'Cc05_g04980' => 'ccan', 'Cc05_g04990' => 'ccan', 'CDE01G0213' => 'cde', 'CDE05G0464' => 'cde', 'CDE05G2258' => 'cde', 'CDE11G0554' => 'cde', 'CDE11G0563' => 'cde', 'CDE11G0635' => 'cde', 'CDE11G1136' => 'cde', 'CDE12G0535' => 'cde', 'Cfa006053' => 'cfa', 'Cfa014434' => 'cfa', 'Cfa015513' => 'cfa', 'Cfa021637' => 'cfa', 'Ciclev10005432m.g' => 'ccl', 'Ciclev10007121m.g' => 'ccl', 'Ciclev10015924m.g' => 'ccl', 'Ciclev10017908m.g' => 'ccl', 'CiPaw.03G162400' => 'cil', 'CiPaw.04G117400' => 'cil', 'CiPaw.07G098700' => 'cil', 'CiPaw.10G067900' => 'cil', 'ClCG02G001790' => 'cla', 'ClCG02G008470' => 'cla', 'ClCG06G005500' => 'cla', 'ClCG06G005510' => 'cla', 'COL.COLO4_08041' => 'col', 'COL.COLO4_08042' => 'col', 'COL.COLO4_13958' => 'col', 'COL.COLO4_13959' => 'col', 'COL.COLO4_16863' => 'col', 'COL.COLO4_27675' => 'col', 'COL.COLO4_27676' => 'col', 'COL.COLO4_27677' => 'col', 'Cpa.g.sc16.92' => 'cpa', 'Cpa.g.sc198.1' => 'cpa', 'Cpa.g.sc2186.1' => 'cpa', 'Cpa.g.sc8.230' => 'cpa', 'Cpa.g.sc8.231' => 'cpa', 'Cpa.g.sc8.232' => 'cpa', 'Cpa.g.sc9.151' => 'cpa', 'CsaV3_2G035150' => 'csa', 'CsaV3_6G005630' => 'csa', 'CsaV3_7G003750' => 'csa', 'CSS0005522' => 'camsi', 'CSS0017295' => 'camsi', 'CSS0028431' => 'camsi', 'CSS0032700' => 'camsi', 'CSS0035969' => 'camsi', 'CSS0036033' => 'camsi', 'CSS0042853' => 'camsi', 'CSS0042965' => 'camsi', 'CSS0048147' => 'camsi', 'CSS0050400' => 'camsi', 'DCAR_008121' => 'dca', 'DCAR_012951' => 'dca', 'DCAR_012952' => 'dca', 'DCAR_012954' => 'dca', 'DCAR_017793' => 'dca', 'DCAR_019212' => 'dca', 'DCAR_019407' => 'dca', 'DCAR_019773' => 'dca', 'DCAR_021186' => 'dca', 'Dinv02747' => 'din', 'Dinv02748' => 'din', 'Dinv05259' => 'din', 'Dinv09827' => 'din', 'Dinv18526' => 'din', 'Dinv18527' => 'din', 'Dinv20011' => 'din', 'Dinv38338' => 'din', 'Dinv39689' => 'din', 'Duzib133G0501' => 'dzi', 'Duzib151G0287' => 'dzi', 'Duzib151G0621' => 'dzi', 'Duzib151G0834' => 'dzi', 'Duzib251G0252' => 'dzi', 'Duzib251G0686' => 'dzi', 'Duzib268G0123' => 'dzi', 'Duzib268G1838' => 'dzi', 'ECA233G0745' => 'eca', 'ECA233G1314' => 'eca', 'ECA233G2994' => 'eca', 'ECA246G2946' => 'eca', 'ECA248G2749' => 'eca', 'EL10Ac5g11906' => 'bvu', 'EL10Ac6g15541' => 'bvu', 'EL10Ac6g15542' => 'bvu', 'EL10Ac8g20623' => 'bvu', 'EL10Ac9g22488' => 'bvu', 'Eucgr.B01255' => 'egr', 'Eucgr.C02744' => 'egr', 'Eucgr.C02747' => 'egr', 'Eucgr.C02751' => 'egr', 'Eucgr.E03708' => 'egr', 'Eucgr.E03715' => 'egr', 'Eucgr.E03716' => 'egr', 'Eucgr.E04120' => 'egr', 'Eucgr.E04121' => 'egr', 'Eucgr.H01218' => 'egr', 'Eucgr.H03666' => 'egr', 'Eucgr.H03667' => 'egr', 'Eucgr.H03669' => 'egr', 'Eucgr.K00806' => 'egr', 'Eucgr.K00809' => 'egr', 'Eucgr.L01603' => 'egr', 'FAN02G3069' => 'fan', 'FAN05G2279' => 'fan', 'FAN05G5326' => 'fan', 'FAN07G1870' => 'fan', 'FAN09G1538' => 'fan', 'FAN12G0211' => 'fan', 'FAN12G2901' => 'fan', 'FAN14G3436' => 'fan', 'FAN14G4836' => 'fan', 'FAN15G2870' => 'fan', 'FAN17G2047' => 'fan', 'FAN20G0743' => 'fan', 'FAN22G1719' => 'fan', 'FAN24G3099' => 'fan', 'FAN25G2771' => 'fan', 'FAN27G3156' => 'fan', 'FvH4_2g26620' => 'fve', 'FvH4_3g02700' => 'fve', 'FvH4_4g16970' => 'fve', 'FvH4_6g43490' => 'fve', 'FvH4_6g43500' => 'fve', 'Glyma.02G151700' => 'gma', 'Glyma.03G208100' => 'gma', 'Glyma.03G208200' => 'gma', 'Glyma.10G022500' => 'gma', 'Glyma.12G101200' => 'gma', 'Glyma.12G195500' => 'gma', 'Glyma.12G195600' => 'gma', 'Glyma.13G306900' => 'gma', 'Glyma.13G307000' => 'gma', 'Glyma.19G205300' => 'gma', 'Glyma.U031413' => 'gma', 'Glyma.U031513' => 'gma', 'Gohir.A03G109800' => 'ghi', 'Gohir.A03G110100' => 'ghi', 'Gohir.A09G061300' => 'ghi', 'Gohir.A10G102211' => 'ghi', 'Gohir.A10G102266' => 'ghi', 'Gohir.A12G007900' => 'ghi', 'Gohir.A12G008000' => 'ghi', 'Gohir.A12G008100' => 'ghi', 'Gohir.A12G008200' => 'ghi', 'Gohir.A12G156000' => 'ghi', 'Gohir.A13G091800' => 'ghi', 'Gohir.A13G091900' => 'ghi', 'Gohir.A13G092000' => 'ghi', 'Gohir.D02G134600' => 'ghi', 'Gohir.D02G134700' => 'ghi', 'Gohir.D09G060200' => 'ghi', 'Gohir.D10G165300' => 'ghi', 'Gohir.D10G165400' => 'ghi', 'Gohir.D12G007300' => 'ghi', 'Gohir.D12G007600' => 'ghi', 'Gohir.D12G007700' => 'ghi', 'Gohir.D12G007800' => 'ghi', 'Gohir.D12G007900' => 'ghi', 'Gohir.D12G159100' => 'ghi', 'Gohir.D13G087000' => 'ghi', 'Gohir.D13G087100' => 'ghi', 'Gohir.D13G087300' => 'ghi', 'Gorai.005G150500' => 'gra', 'Gorai.005G150600' => 'gra', 'Gorai.006G074900' => 'gra', 'Gorai.008G007500' => 'gra', 'Gorai.008G007600' => 'gra', 'Gorai.008G007700' => 'gra', 'Gorai.008G172200' => 'gra', 'Gorai.011G184500' => 'gra', 'Gorai.011G184600' => 'gra', 'Gorai.013G099400' => 'gra', 'Gorai.013G099500' => 'gra', 'Gorai.013G099600' => 'gra', 'GSVIVG01011017001' => 'vvi', 'GSVIVG01012624001' => 'vvi', 'GSVIVG01017829001' => 'vvi', 'GSVIVG01017830001' => 'vvi', 'GSVIVG01030615001' => 'vvi', 'GSVIVG01030616001' => 'vvi', 'HanXRQChr01g0003401' => 'han', 'HanXRQChr01g0003431' => 'han', 'HanXRQChr01g0003451' => 'han', 'HanXRQChr03g0068911' => 'han', 'HanXRQChr08g0226521' => 'han', 'HanXRQChr08g0226531' => 'han', 'HanXRQChr09g0254581' => 'han', 'HanXRQChr09g0254591' => 'han', 'HanXRQChr10g0294991' => 'han', 'HanXRQChr11g0325831' => 'han', 'HanXRQChr15g0479151' => 'han', 'HanXRQChr17g0543531' => 'han', 'HanXRQChr17g0543601' => 'han', 'Haze_01037' => 'cav', 'Haze_04799' => 'cav', 'Haze_06728' => 'cav', 'Haze_06731' => 'cav', 'Haze_12892' => 'cav', 'Hma1.2p1_0399F.1_g144270' => 'hma', 'Hma1.2p1_0399F.1_g144290' => 'hma', 'Hma1.2p1_0613F.1_g189120' => 'hma', 'Hma1.2p1_0729F.1_g209570' => 'hma', 'Hma1.2p1_1049F.1_g251870' => 'hma', 'Hma1.2p1_2032F.1_g311820' => 'hma', 'Hma1.2p1_3445F.1_g336080' => 'hma', 'HPP92_010633' => 'vpl', 'HPP92_014113' => 'vpl', 'Hund08043' => 'sun', 'Hund08044' => 'sun', 'Hund21375' => 'sun', 'Hund24901' => 'sun', 'Lalb_Chr02g0143031' => 'lal', 'Lalb_Chr03g0028861' => 'lal', 'Lalb_Chr14g0375721' => 'lal', 'Lalb_Chr24g0393091' => 'lal', 'Lj1A756T93' => 'lonja', 'Lj1A756T94' => 'lonja', 'Lj1A756T95' => 'lonja', 'Lj2A274T63' => 'lonja', 'Lj2g0012937' => 'lja', 'Lj2g0025159' => 'lja', 'Lj2g0028122' => 'lja', 'Lj3A809G81' => 'lonja', 'Lj3A809T59' => 'lonja', 'Lj3A809T61' => 'lonja', 'Lj3A810T52' => 'lonja', 'Lj3A810T54' => 'lonja', 'Lj3g0000439' => 'lja', 'Lj3g0009258' => 'lja', 'Lj3g0009565' => 'lja', 'Lj5A404T43' => 'lonja', 'Lj8A123G36' => 'lonja', 'Lj8A123T54' => 'lonja', 'Lj8C123T14' => 'lonja', 'Lsat_1_v5_gn_1_121721' => 'lsa', 'Lsat_1_v5_gn_1_121741' => 'lsa', 'Lsat_1_v5_gn_1_121761' => 'lsa', 'Lsat_1_v5_gn_1_121801' => 'lsa', 'Lsat_1_v5_gn_1_121821' => 'lsa', 'Lsat_1_v5_gn_1_126621' => 'lsa', 'Lsat_1_v5_gn_1_126661' => 'lsa', 'Lsat_1_v5_gn_3_43821' => 'lsa', 'Lsat_1_v5_gn_6_14620' => 'lsa', 'Lsat_1_v5_gn_6_14640' => 'lsa', 'Lsat_1_v5_gn_6_14760' => 'lsa', 'Lsat_1_v5_gn_8_129120' => 'lsa', 'Lsat_1_v5_gn_8_129141' => 'lsa', 'Lsat_1_v5_gn_8_129161' => 'lsa', 'Lsat_1_v5_gn_8_129240' => 'lsa', 'Lsat_1_v5_gn_8_129280' => 'lsa', 'Lsat_1_v5_gn_8_129300' => 'lsa', 'Lsat_1_v5_gn_8_129320' => 'lsa', 'Manes.03G189800' => 'mes', 'Manes.03G189900' => 'mes', 'Manes.05G069400' => 'mes', 'Manes.05G069500' => 'mes', 'Manes.05G069600' => 'mes', 'Manes.12G076200' => 'mes', 'Manes.12G076300' => 'mes', 'Manes.12G076301' => 'mes', 'Manes.12G123001' => 'mes', 'Manes.13G072600' => 'mes', 'Manes.13G103100' => 'mes', 'Manes.13G103928' => 'mes', 'Manes.15G018400' => 'mes', 'Manes.15G018500' => 'mes', 'Manes.15G018600' => 'mes', 'Manes.16G012900' => 'mes', 'Manes.16G013000' => 'mes', 'Manes.17G029100' => 'mes', 'Mapoly0004s0091' => 'mpo', 'Mapoly0004s0092' => 'mpo', 'Mapoly0004s0093' => 'mpo', 'Mapoly0004s0094' => 'mpo', 'Mapoly0006s0133' => 'mpo', 'Mapoly0008s0232' => 'mpo', 'Mapoly0008s0265' => 'mpo', 'Mapoly0009s0175' => 'mpo', 'Mapoly0015s0156' => 'mpo', 'Mapoly0024s0047' => 'mpo', 'Mapoly0025s0020' => 'mpo', 'Mapoly0031s0176' => 'mpo', 'Mapoly0032s0056' => 'mpo', 'Mapoly0032s0061' => 'mpo', 'Mapoly0032s0068' => 'mpo', 'Mapoly0032s0069' => 'mpo', 'Mapoly0032s0070' => 'mpo', 'Mapoly0032s0071' => 'mpo', 'Mapoly0032s0072' => 'mpo', 'Mapoly0032s0073' => 'mpo', 'Mapoly0032s0074' => 'mpo', 'Mapoly0032s0142' => 'mpo', 'Mapoly0032s0143' => 'mpo', 'Mapoly0032s0144' => 'mpo', 'Mapoly0032s0145' => 'mpo', 'Mapoly0038s0040' => 'mpo', 'Mapoly0039s0113' => 'mpo', 'Mapoly0039s0115' => 'mpo', 'Mapoly0040s0117' => 'mpo', 'Mapoly0042s0076' => 'mpo', 'Mapoly0043s0074' => 'mpo', 'Mapoly0043s0075' => 'mpo', 'Mapoly0047s0006' => 'mpo', 'Mapoly0048s0001' => 'mpo', 'Mapoly0050s0028' => 'mpo', 'Mapoly0050s0029' => 'mpo', 'Mapoly0054s0141' => 'mpo', 'Mapoly0057s0076' => 'mpo', 'Mapoly0057s0077' => 'mpo', 'Mapoly0058s0119' => 'mpo', 'Mapoly0065s0079' => 'mpo', 'Mapoly0068s0084' => 'mpo', 'Mapoly0070s0094' => 'mpo', 'Mapoly0073s0003' => 'mpo', 'Mapoly0077s0042' => 'mpo', 'Mapoly0077s0043' => 'mpo', 'Mapoly0084s0001' => 'mpo', 'Mapoly0084s0002' => 'mpo', 'Mapoly0084s0011' => 'mpo', 'Mapoly0084s0012' => 'mpo', 'Mapoly0087s0046' => 'mpo', 'Mapoly0089s0017' => 'mpo', 'Mapoly0100s0018' => 'mpo', 'Mapoly0106s0049' => 'mpo', 'Mapoly0106s0050' => 'mpo', 'Mapoly0106s0051' => 'mpo', 'Mapoly0106s0052' => 'mpo', 'Mapoly0106s0053' => 'mpo', 'Mapoly0106s0054' => 'mpo', 'Mapoly0109s0003' => 'mpo', 'Mapoly0109s0004' => 'mpo', 'Mapoly0115s0041' => 'mpo', 'Mapoly0117s0003' => 'mpo', 'Mapoly0124s0038' => 'mpo', 'Mapoly0124s0039' => 'mpo', 'Mapoly0127s0001' => 'mpo', 'Mapoly0127s0002' => 'mpo', 'Mapoly0127s0014' => 'mpo', 'Mapoly0133s0056' => 'mpo', 'Mapoly0136s0009' => 'mpo', 'Mapoly0136s0034' => 'mpo', 'Mapoly0136s0035' => 'mpo', 'Mapoly0141s0008' => 'mpo', 'Mapoly0141s0009' => 'mpo', 'Mapoly0143s0040' => 'mpo', 'Mapoly0143s0041' => 'mpo', 'Mapoly0147s0045' => 'mpo', 'Mapoly0161s0001' => 'mpo', 'Mapoly0171s0001' => 'mpo', 'Mapoly0182s0001' => 'mpo', 'Mapoly0182s0002' => 'mpo', 'Mapoly0182s0003' => 'mpo', 'Mapoly0182s0004' => 'mpo', 'Mapoly0189s0022' => 'mpo', 'Mapoly0195s0010' => 'mpo', 'Mapoly0196s0010' => 'mpo', 'Mapoly0196s0011' => 'mpo', 'Mapoly0196s0012' => 'mpo', 'Mapoly0196s0013' => 'mpo', 'Mapoly0196s0015' => 'mpo', 'Mapoly0196s0016' => 'mpo', 'Mapoly0198s0001' => 'mpo', 'Mapoly0198s0002' => 'mpo', 'Mapoly0198s0004' => 'mpo', 'Mapoly0220s0001' => 'mpo', 'Mapoly0220s0003' => 'mpo', 'Mapoly0220s0004' => 'mpo', 'Mapoly0221s0009' => 'mpo', 'Mapoly0246s0006' => 'mpo', 'Mapoly0282s0001' => 'mpo', 'Mapoly0332s0001' => 'mpo', 'Mapoly0341s0001' => 'mpo', 'Mapoly0410s0001' => 'mpo', 'Mapoly0410s0003' => 'mpo', 'Mapoly0486s0001' => 'mpo', 'Mapoly0562s0001' => 'mpo', 'Mapoly0594s0002' => 'mpo', 'Mapoly1410s0001' => 'mpo', 'Mapoly2709s0001' => 'mpo', 'Mapoly2722s0001' => 'mpo', 'Mapoly2760s0001' => 'mpo', 'Mapoly3855s0001' => 'mpo', 'MBI02_g10991_MAGBIO' => 'mbi', 'MBI18_g06809_MAGBIO' => 'mbi', 'MBI18_g15812_MAGBIO' => 'mbi', 'MBI19_g09856_MAGBIO' => 'mbi', 'MBI19_g18850_MAGBIO' => 'mbi', 'MBI19_g20945_MAGBIO' => 'mbi', 'MBI19_g20947_MAGBIO' => 'mbi', 'MD03G1274400' => 'mdo', 'MD03G1274500' => 'mdo', 'MD09G1105900' => 'mdo', 'MD09G1106000' => 'mdo', 'MD13G1175300' => 'mdo', 'MD16G1177000' => 'mdo', 'MD17G1092400' => 'mdo', 'MD17G1093600' => 'mdo', 'Medtr2g088770' => 'mtr', 'Medtr4g046713' => 'mtr', 'Medtr7g107500' => 'mtr', 'Medtr7g107520' => 'mtr', 'MELO3C018804.2' => 'cme', 'MELO3C019239.2' => 'cme', 'MELO3C021373.2' => 'cme', 'Migut.G00224' => 'egut', 'Migut.G00225' => 'egut', 'Migut.G00226' => 'egut', 'Migut.H01548' => 'egut', 'Migut.I00227' => 'egut', 'Migut.M00399' => 'egut', 'Migut.M00400' => 'egut', 'Migut.M00401' => 'egut', 'Migut.M00402' => 'egut', 'Migut.M00403' => 'egut', 'Migut.M00404' => 'egut', 'Migut.M00405' => 'egut', 'Migut.M00406' => 'egut', 'Migut.M00407' => 'egut', 'Migut.M00408' => 'egut', 'MSTRG.6550' => 'ama', 'MSTRG.6552' => 'ama', 'MSTRG.6553' => 'ama', 'Nitab4.5_0000006g0050' => 'nta', 'Nitab4.5_0000482g0090' => 'nta', 'Nitab4.5_0000482g0170' => 'nta', 'Nitab4.5_0000482g0180' => 'nta', 'Nitab4.5_0000631g0070' => 'nta', 'Nitab4.5_0000631g0080' => 'nta', 'Nitab4.5_0000631g0090' => 'nta', 'Nitab4.5_0000631g0110' => 'nta', 'Nitab4.5_0000780g0010' => 'nta', 'Nitab4.5_0000900g0090' => 'nta', 'Nitab4.5_0001149g0070' => 'nta', 'Nitab4.5_0001176g0090' => 'nta', 'Nitab4.5_0001237g0050' => 'nta', 'Nitab4.5_0001459g0110' => 'nta', 'Nitab4.5_0002807g0020' => 'nta', 'Nitab4.5_0003354g0010' => 'nta', 'Nitab4.5_0003449g0080' => 'nta', 'Nitab4.5_0004428g0020' => 'nta', 'Nitab4.5_0006207g0010' => 'nta', 'Nitab4.5_0007020g0010' => 'nta', 'Nitab4.5_0009936g0030' => 'nta', 'Nitab4.5_0010743g0010' => 'nta', 'Nitab4.5_0010930g0020' => 'nta', 'Nitab4.5_0011454g0010' => 'nta', 'Nitab4.5_0012069g0010' => 'nta', 'Nitab4.5_0012091g0020' => 'nta', 'Nitab4.5_0013816g0010' => 'nta', 'Nitab4.5_0014169g0010' => 'nta', 'Nitab4.5_0021096g0010' => 'nta', 'Nn1g03643' => 'nnu', 'Nn1g03644' => 'nnu', 'Nn1g03645' => 'nnu', 'Nn1g07011' => 'nnu', 'Nn1g07012' => 'nnu', 'Nn1g07013' => 'nnu', 'Nn1g07022' => 'nnu', 'Nn2g14212' => 'nnu', 'Nn3g21245' => 'nnu', 'Nn4g26071' => 'nnu', 'Nn4g26072' => 'nnu', 'Nn5g28225' => 'nnu', 'Nn5g28896' => 'nnu', 'Nn5g28897' => 'nnu', 'Nn8g39434' => 'nnu', 'Oeu010962.1' => 'oeu', 'Oeu011086.1' => 'oeu', 'Oeu026884.1' => 'oeu', 'Oeu037343.1' => 'oeu', 'Oeu037346.1' => 'oeu', 'Oeu041935.1' => 'oeu', 'Oeu061987.1' => 'oeu', 'Oeu062067.1' => 'oeu', 'Oeu062069.1' => 'oeu', 'Oeu062070.1' => 'oeu', 'Os01g0270300' => 'osa', 'Os01g0787000' => 'osa', 'Os02g0161800' => 'osa', 'Os03g0563600' => 'osa', 'Os05g0499300' => 'osa', 'Os05g0499400' => 'osa', 'Os06g0306300' => 'osa', 'Os06g0490400' => 'osa', 'Os06g0681600' => 'osa', 'Os07g0104100' => 'osa', 'Os07g0104500' => 'osa', 'Os07g0531400' => 'osa', 'Os11g0661600' => 'osa', 'Os12g0530100' => 'osa', 'Peaxi162Scf00007g01118' => 'pax', 'Peaxi162Scf00012g00347' => 'pax', 'Peaxi162Scf00012g00364' => 'pax', 'Peaxi162Scf00012g00388' => 'pax', 'Peaxi162Scf00012g03512' => 'pax', 'Peaxi162Scf00033g01917' => 'pax', 'Peaxi162Scf00048g02225' => 'pax', 'Peaxi162Scf00048g02227' => 'pax', 'Peaxi162Scf00048g02228' => 'pax', 'Peaxi162Scf00105g00010' => 'pax', 'Peaxi162Scf00259g00077' => 'pax', 'Peaxi162Scf00416g00216' => 'pax', 'Peaxi162Scf00531g00036' => 'pax', 'Peaxi162Scf00532g00005' => 'pax', 'Peaxi162Scf00781g00051' => 'pax', 'Peaxi162Scf00921g00136' => 'pax', 'Peaxi162Scf01364g00011' => 'pax', 'Peaxi162Scf01364g00018' => 'pax', 'PGR004G0695' => 'pgr', 'PGR004G1370' => 'pgr', 'PGR004G2259' => 'pgr', 'PGR031G0671' => 'pgr', 'PGR031G1327' => 'pgr', 'PGR042G1518' => 'pgr', 'PGR044G2733' => 'pgr', 'PGR088G0007' => 'pgr', 'PGR142G1275' => 'pgr', 'PGR142G1572' => 'pgr', 'PGR143G0002' => 'pgr', 'PGR143G0003' => 'pgr', 'PGSC0003DMG400000693' => 'stu', 'PGSC0003DMG400000694' => 'stu', 'PGSC0003DMG400005272' => 'stu', 'PGSC0003DMG400005273' => 'stu', 'PGSC0003DMG400005279' => 'stu', 'PGSC0003DMG400015035' => 'stu', 'PGSC0003DMG400020975' => 'stu', 'PGSC0003DMG400021801' => 'stu', 'PGSC0003DMG400022848' => 'stu', 'PGSC0003DMG400022850' => 'stu', 'PGSC0003DMG400024329' => 'stu', 'PGSC0003DMG400024330' => 'stu', 'PGSC0003DMG400025490' => 'stu', 'PGSC0003DMG400025491' => 'stu', 'PGSC0003DMG400025492' => 'stu', 'PGSC0003DMG400030764' => 'stu', 'PGSC0003DMG401024332' => 'stu', 'PGSC0003DMG402024332' => 'stu', 'Phvul.001G201300' => 'pvu', 'Phvul.005G113800' => 'pvu', 'Phvul.007G167200' => 'pvu', 'Phvul.011G105900' => 'pvu', 'Potri.004G023100' => 'ptr', 'Potri.004G023200' => 'ptr', 'Potri.007G122100' => 'ptr', 'Potri.007G122200' => 'ptr', 'Potri.007G122250' => 'ptr', 'Potri.007G122301' => 'ptr', 'Potri.007G122351' => 'ptr', 'Potri.007G122401' => 'ptr', 'Potri.007G122451' => 'ptr', 'Potri.011G027300' => 'ptr', 'Potri.012G042800' => 'ptr', 'Potri.014G135580' => 'ptr', 'Potri.017G037900' => 'ptr', 'Potri.017G038100' => 'ptr', 'Potri.019G063201' => 'ptr', 'Pp3c13_1880' => 'ppa', 'Pp3c3_1110' => 'ppa', 'Prupe.1G143900' => 'ppe', 'Prupe.3G219600' => 'ppe', 'Prupe.3G219700' => 'ppe', 'Prupe.4G026700' => 'ppe', 'Prupe.8G251100' => 'ppe', 'Psat0s5206g0040' => 'psa', 'Psat3g025400' => 'psa', 'Psat5g265240' => 'psa', 'Psat6g168600' => 'psa', 'Psat7g198640' => 'psa', 'PSO017G3267' => 'pso', 'PSO063G3698' => 'pso', 'PSO063G5088' => 'pso', 'PSO063G5545' => 'pso', 'PSO063G6278' => 'pso', 'PSO135G0663' => 'pso', 'PSO135G0936' => 'pso', 'PSO135G0987' => 'pso', 'PSO170G0792' => 'pso', 'PSO170G2382' => 'pso', 'PSO170G2701' => 'pso', 'PSO170G5029' => 'pso', 'PSO170G5934' => 'pso', 'PSO210G0269' => 'pso', 'PSO210G6309' => 'pso', 'PSO210G6810' => 'pso', 'PSO384G1570' => 'pso', 'PSO384G4214' => 'pso', 'PSO407G0102' => 'pso', 'PSO407G0341' => 'pso', 'PSO478G0724' => 'pso', 'PSO478G0767' => 'pso', 'PSO541G1338' => 'pso', 'PSO541G4296' => 'pso', 'PSO675G1481' => 'pso', 'PSO675G1713' => 'pso', 'PSO675G2261' => 'pso', 'PSO782G3604' => 'pso', 'PSO782G4001' => 'pso', 'PSO832G1741' => 'pso', 'QL05p075255' => 'qlo', 'QL05p075272' => 'qlo', 'QL05p075300' => 'qlo', 'QL06p006826' => 'qlo', 'QL06p006856' => 'qlo', 'QL06p006887' => 'qlo', 'QL06p006896' => 'qlo', 'QL07p015884' => 'qlo', 'QL08p033704' => 'qlo', 'QL08p033708' => 'qlo', 'QL11p021784' => 'qlo', 'QL11p021792' => 'qlo', 'QL12p023797' => 'qlo', 'RcHm_v2.0_Chr2g0159961' => 'rch', 'RcHm_v2.0_Chr2g0159971' => 'rch', 'RcHm_v2.0_Chr2g0160001' => 'rch', 'RcHm_v2.0_Chr4g0420641' => 'rch', 'RcHm_v2.0_Chr5g0004041' => 'rch', 'RcHm_v2.0_Chr5g0004051' => 'rch', 'RcHm_v2.0_Chr5g0004061' => 'rch', 'RcHm_v2.0_Chr6g0295471' => 'rch', 'Rhsim02G0112400' => 'rsi', 'Rhsim04G0056100' => 'rsi', 'Rhsim04G0056200' => 'rsi', 'Rhsim04G0056300' => 'rsi', 'Rhsim04G0214600' => 'rsi', 'Rhsim04G0214700' => 'rsi', 'Rhsim04G0214800' => 'rsi', 'Rhsim04G0214900' => 'rsi', 'Rhsim04G0215000' => 'rsi', 'Rhsim04G0215100' => 'rsi', 'SalBow2G0219' => 'sbo', 'SalBow7G4688' => 'sbo', 'Sc06g0005450' => 'sci', 'Sc06g0005460' => 'sci', 'Sc06g0005470' => 'sci', 'Sc06g0005480' => 'sci', 'Sc06g0005520' => 'sci', 'Sc06g0009450' => 'sci', 'Sc06g0009480' => 'sci', 'Sc06g0009490' => 'sci', 'Sc06g0009500' => 'sci', 'Sc06g0009510' => 'sci', 'Sc06g0009520' => 'sci', 'Sc12g0002360' => 'sci', 'Sc13g0003710' => 'sci', 'Sc15g0003720' => 'sci', 'Sc21g0001640' => 'sci', 'Sed0002864' => 'sed', 'Sed0003682' => 'sed', 'Sed0004802' => 'sed', 'Sed0006037' => 'sed', 'Sed0016340' => 'sed', 'Sed0024532' => 'sed', 'SEGI_01291' => 'sgi', 'SEGI_01678' => 'sgi', 'SEGI_02728' => 'sgi', 'SEGI_06935' => 'sgi', 'SEGI_11935' => 'sgi', 'SEGI_12339' => 'sgi', 'SEGI_14399' => 'sgi', 'SEGI_14618' => 'sgi', 'SEGI_15834' => 'sgi', 'SEGI_15921' => 'sgi', 'SEGI_17358' => 'sgi', 'SEGI_17895' => 'sgi', 'SEGI_21228' => 'sgi', 'SEGI_22685' => 'sgi', 'SEGI_23275' => 'sgi', 'SEGI_24638' => 'sgi', 'SEGI_27431' => 'sgi', 'SEGI_28276' => 'sgi', 'SEGI_31577' => 'sgi', 'SEGI_32769' => 'sgi', 'SEGI_34969' => 'sgi', 'SEGI_40798' => 'sgi', 'SGA_v2.0_scaffold70G23413' => 'sas', 'SGA_v2.0_scaffold70G23415' => 'sas', 'SMO174G0030' => 'smo', 'SMO203G0210' => 'smo', 'SMO276G0008' => 'smo', 'SMO307G0013' => 'smo', 'SMO351G0534' => 'smo', 'Solyc01g067850.2' => 'sly', 'Solyc01g067860.3' => 'sly', 'Solyc01g067870.3' => 'sly', 'Solyc01g067880.3' => 'sly', 'Solyc04g056420.1' => 'sly', 'Solyc05g046000.4' => 'sly', 'Solyc05g046010.4' => 'sly', 'Solyc05g046020.3' => 'sly', 'Solyc05g046030.4' => 'sly', 'Solyc06g054500.1' => 'sly', 'Solyc07g047740.3' => 'sly', 'Solyc07g049240.3' => 'sly', 'Solyc07g052510.4' => 'sly', 'Solyc07g052530.3' => 'sly', 'Solyc07g052540.3' => 'sly', 'Solyc07g052550.2' => 'sly', 'Solyc08g075830.4' => 'sly', 'Solyc12g005370.2' => 'sly', 'Solyc12g005783.1' => 'sly', 'Solyc12g005787.1' => 'sly', 'Solyc12g005790.2' => 'sly', 'Sopen01g029800' => 'spe', 'Sopen01g029810' => 'spe', 'Sopen01g029820' => 'spe', 'Sopen01g029830' => 'spe', 'Sopen04g025320' => 'spe', 'Sopen05g027200' => 'spe', 'Sopen05g027220' => 'spe', 'Sopen05g027240' => 'spe', 'Sopen05g027260' => 'spe', 'Sopen06g019570' => 'spe', 'Sopen07g024190' => 'spe', 'Sopen07g025260' => 'spe', 'Sopen07g025270' => 'spe', 'Sopen07g026130' => 'spe', 'Sopen07g026140' => 'spe', 'Sopen07g026150' => 'spe', 'Sopen08g024470' => 'spe', 'Sopen12g001340' => 'spe', 'Sopen12g001720' => 'spe', 'Sopen12g001730' => 'spe', 'Sopen12g001740' => 'spe', 'Sp1g04090' => 'spa', 'Sp1g04100' => 'spa', 'Sp1g04110' => 'spa', 'Sp1g04120' => 'spa', 'Sp3g00910' => 'spa', 'Sp3g19770' => 'spa', 'Sp4g21390' => 'spa', 'Sp6g06140' => 'spa', 'Sp6g28890' => 'spa', 'SpUn0024_0020' => 'spa', 'SpUn0024_0030' => 'spa', 'SpUn0024_0040' => 'spa', 'SpUn0024_0050' => 'spa', 'TAR362G0243' => 'tar', 'TAR365G0010' => 'tar', 'TAR626G1396' => 'tar', 'TAR626G1865' => 'tar', 'TAR627G0301' => 'tar', 'TAR627G0812' => 'tar', 'TAR629G0760' => 'tar', 'TAR629G1156' => 'tar', 'THA.LOC104800982' => 'tha', 'THA.LOC104802212' => 'tha', 'THA.LOC104802539' => 'tha', 'THA.LOC104802564' => 'tha', 'THA.LOC104814404' => 'tha', 'THA.LOC104816044' => 'tha', 'THA.LOC104817535' => 'tha', 'THA.LOC104822363' => 'tha', 'THA.LOC104826155' => 'tha', 'Thecc.01G289100' => 'tca', 'Thecc.02G312200' => 'tca', 'Thecc.02G312300' => 'tca', 'Thecc.04G275000' => 'tca', 'Thhalv10008157m.g' => 'esa', 'Thhalv10008189m.g' => 'esa', 'Thhalv10008202m.g' => 'esa', 'Thhalv10014085m.g' => 'esa', 'Thhalv10016858m.g' => 'esa', 'Thhalv10021123m.g' => 'esa', 'Thhalv10021152m.g' => 'esa', 'Thhalv10028797m.g' => 'esa', 'TPR.G16942' => 'tpr', 'TPR.G16948' => 'tpr', 'TPR.G19042' => 'tpr', 'TPR.G32315' => 'tpr', 'TPR.G4197' => 'tpr', 'TPR.G4235' => 'tpr', 'TWI36G1397' => 'twi', 'TWI38G1738' => 'twi', 'TWI53G1587' => 'twi', 'TWI63G1192' => 'twi', 'TWI75G1425' => 'twi', 'TWI75G1669' => 'twi', 'vmacro08217' => 'vma', 'vmacro08218' => 'vma', 'vmacro08219' => 'vma', 'vmacro08220' => 'vma', 'vmacro08221' => 'vma', 'vmacro08222' => 'vma', 'vmacro09326' => 'vma', 'vmacro09327' => 'vma', 'vmacro09329' => 'vma', 'vmacro09330' => 'vma', 'vmacro15834' => 'vma', 'VMungo0720G0370' => 'vmu', 'VMungo0720G2052' => 'vmu', 'VMungo1080G1869' => 'vmu', 'VMungo1127G0464' => 'vmu', 'VMungo1383G2736' => 'vmu', 'Zm00001eb043100' => 'zma', 'Zm00001eb128620' => 'zma', 'Zm00001eb207640' => 'zma', 'Zm00001eb225230' => 'zma', 'Zm00001eb281180' => 'zma', 'Zm00001eb291850' => 'zma', 'Zm00001eb291860' => 'zma', 'Zm00001eb298200' => 'zma', 'Zm00001eb298210' => 'zma', 'Zm00001eb298220' => 'zma', 'Zm00001eb315680' => 'zma', 'Zm00001eb332990' => 'zma', 'Zm00001eb381290' => 'zma', 'Zm00001eb381300' => 'zma', 'Zm00001eb410710' => 'zma', 'Zm00001eb431400' => 'zma' ) $gf_id = 'ORTHO05D000366' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'ORTHO05D000366' ) $data_identifier = 'ORTHO05D000366' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 37, 'aar' => (int) 12, 'aag' => (int) 1, 'ach' => (int) 4, 'amhyb' => (int) 12, 'aly' => (int) 10, 'aox' => (int) 6, 'arhy' => (int) 8, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 4, 'cqu' => (int) 15, 'bca' => (int) 29, 'bol' => (int) 18, 'bra' => (int) 17, 'can' => (int) 6, 'cansat' => (int) 15, 'chi' => (int) 8, 'cru' => (int) 9, 'car' => (int) 5, 'ccan' => (int) 12, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 4, 'cil' => (int) 4, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 3, 'camsi' => (int) 10, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 8, 'eca' => (int) 5, 'bvu' => (int) 5, 'egr' => (int) 16, 'fan' => (int) 16, 'fve' => (int) 5, 'gma' => (int) 12, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 6, 'han' => (int) 13, 'cav' => (int) 5, 'hma' => (int) 7, 'vpl' => (int) 2, 'sun' => (int) 4, 'lal' => (int) 4, 'lonja' => (int) 13, 'lja' => (int) 6, 'lsa' => (int) 18, 'mes' => (int) 18, 'mpo' => (int) 112, 'mbi' => (int) 7, 'mdo' => (int) 8, 'mtr' => (int) 4, 'cme' => (int) 3, 'egut' => (int) 15, 'ama' => (int) 3, 'nta' => (int) 29, 'nnu' => (int) 15, 'oeu' => (int) 10, 'osa' => (int) 14, 'pax' => (int) 18, 'pgr' => (int) 12, 'stu' => (int) 18, 'pvu' => (int) 4, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 5, 'psa' => (int) 5, 'pso' => (int) 30, 'qlo' => (int) 13, 'rch' => (int) 8, 'rsi' => (int) 10, 'sbo' => (int) 2, 'sci' => (int) 15, 'sed' => (int) 6, 'sgi' => (int) 22, 'sas' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 21, 'spe' => (int) 21, 'spa' => (int) 13, 'tar' => (int) 8, 'tha' => (int) 9, 'tca' => (int) 4, 'esa' => (int) 8, 'tpr' => (int) 6, 'twi' => (int) 6, 'vma' => (int) 11, 'vmu' => (int) 5, 'zma' => (int) 16 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb431400' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1